J3_8OIR_003

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUC*GCAGUAA*UGAACAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|AA|C|545
8OIR|1|AA|U|546
8OIR|1|AA|C|547
*
8OIR|1|AA|G|781
8OIR|1|AA|C|782
8OIR|1|AA|A|783
8OIR|1|AA|G|784
8OIR|1|AA|U|785
8OIR|1|AA|A|786
8OIR|1|AA|A|787
*
8OIR|1|AA|U|809
8OIR|1|AA|G|810
8OIR|1|AA|A|811
8OIR|1|AA|A|812
8OIR|1|AA|C|813
8OIR|1|AA|A|814
8OIR|1|AA|G|815

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AF

28S ribosomal protein S7, mitochondrial

Chain Ac

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain Ag

28S ribosomal protein S9, mitochondrial