J3_8OIR_005

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGUAAUC*GAUCAACCUCAC*GCAA

Length

23 nucleotides

Bulged bases

8OIR|1|AA|U|582, 8OIR|1|AA|C|583, 8OIR|1|AA|A|585

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|AA|U|563
8OIR|1|AA|G|564
8OIR|1|AA|U|565
8OIR|1|AA|A|566
8OIR|1|AA|A|567
8OIR|1|AA|U|568
8OIR|1|AA|C|569
*
8OIR|1|AA|G|580
8OIR|1|AA|A|581
8OIR|1|AA|U|582
8OIR|1|AA|C|583
8OIR|1|AA|A|584
8OIR|1|AA|A|585
8OIR|1|AA|C|586
8OIR|1|AA|C|587
8OIR|1|AA|U|588
8OIR|1|AA|C|589
8OIR|1|AA|A|590
8OIR|1|AA|C|591
*
8OIR|1|AA|G|704
8OIR|1|AA|C|705
8OIR|1|AA|A|706
8OIR|1|AA|A|707

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AH

28S ribosomal protein S10, mitochondrial

Chain AK

28S ribosomal protein S14, mitochondrial

Chain Aa

Peptide chain release factor 1, mitochondrial