J3_8OIR_007

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUUUU*AAAACUAC*GGUG

Length

18 nucleotides

Bulged bases

8OIR|1|AA|U|722, 8OIR|1|AA|C|738, 8OIR|1|AA|U|739

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|AA|C|719
8OIR|1|AA|A|720
8OIR|1|AA|U|721
8OIR|1|AA|U|722
8OIR|1|AA|U|723
8OIR|1|AA|U|724
*
8OIR|1|AA|A|734
8OIR|1|AA|A|735
8OIR|1|AA|A|736
8OIR|1|AA|A|737
8OIR|1|AA|C|738
8OIR|1|AA|U|739
8OIR|1|AA|A|740
8OIR|1|AA|C|741
*
8OIR|1|AA|G|771
8OIR|1|AA|G|772
8OIR|1|AA|U|773
8OIR|1|AA|G|774

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AX

28S ribosomal protein S29, mitochondrial

Chain Bv

39S ribosomal protein L46, mitochondrial

Chain Bw

39S ribosomal protein L48, mitochondrial