J3_8OIS_001

3D structure

PDB id

8OIS (explore in PDB, NAKB, or RNA 3D Hub)

Description

28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUCU*ACCCCAG*CAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIS|1|AA|C|30
8OIS|1|AA|U|31
8OIS|1|AA|C|32
8OIS|1|AA|U|33
*
8OIS|1|AA|A|219
8OIS|1|AA|C|220
8OIS|1|AA|C|221
8OIS|1|AA|C|222
8OIS|1|AA|C|223
8OIS|1|AA|A|224
8OIS|1|AA|G|225
*
8OIS|1|AA|C|270
8OIS|1|AA|A|271
8OIS|1|AA|A|272
8OIS|1|AA|G|273

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AO

28S ribosomal protein S18b, mitochondrial