J3_8OIS_002

3D structure

PDB id

8OIS (explore in PDB, NAKB, or RNA 3D Hub)

Description

28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAUU*AUUAACCU*AGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIS|1|AA|G|40
8OIS|1|AA|A|41
8OIS|1|AA|U|42
8OIS|1|AA|U|43
*
8OIS|1|AA|A|176
8OIS|1|AA|U|177
8OIS|1|AA|U|178
8OIS|1|AA|A|179
8OIS|1|AA|A|180
8OIS|1|AA|C|181
8OIS|1|AA|C|182
8OIS|1|AA|U|183
*
8OIS|1|AA|A|209
8OIS|1|AA|G|210
8OIS|1|AA|C|211

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial