J3_8OIS_005

3D structure

PDB id

8OIS (explore in PDB, NAKB, or RNA 3D Hub)

Description

28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGUAAUC*GAUCAACCUCAC*GCAA

Length

23 nucleotides

Bulged bases

8OIS|1|AA|U|582, 8OIS|1|AA|C|583, 8OIS|1|AA|A|585

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIS|1|AA|U|563
8OIS|1|AA|G|564
8OIS|1|AA|U|565
8OIS|1|AA|A|566
8OIS|1|AA|A|567
8OIS|1|AA|U|568
8OIS|1|AA|C|569
*
8OIS|1|AA|G|580
8OIS|1|AA|A|581
8OIS|1|AA|U|582
8OIS|1|AA|C|583
8OIS|1|AA|A|584
8OIS|1|AA|A|585
8OIS|1|AA|C|586
8OIS|1|AA|C|587
8OIS|1|AA|U|588
8OIS|1|AA|C|589
8OIS|1|AA|A|590
8OIS|1|AA|C|591
*
8OIS|1|AA|G|704
8OIS|1|AA|C|705
8OIS|1|AA|A|706
8OIS|1|AA|A|707

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AH

28S ribosomal protein S10, mitochondrial

Chain AK

28S ribosomal protein S14, mitochondrial

Chain Aa

Peptide chain release factor 1, mitochondrial,mtRF1(AAQ)