J3_8OJ8_006

3D structure

PDB id

8OJ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

8OJ8|1|5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OJ8|1|5|A|2551
8OJ8|1|5|G|2552
8OJ8|1|5|A|2553
8OJ8|1|5|U|2554
8OJ8|1|5|G|2555
*
8OJ8|1|5|C|2572
8OJ8|1|5|A|2573
8OJ8|1|5|G|2574
8OJ8|1|5|U|2575
*
8OJ8|1|5|A|2757
8OJ8|1|5|G|2758
8OJ8|1|5|G|2759
8OJ8|1|5|G|2760
8OJ8|1|5|U|2761
8OJ8|1|5|G|2762
8OJ8|1|5|U|2763
8OJ8|1|5|A|2764
8OJ8|1|5|A|2765
8OJ8|1|5|A|2766
8OJ8|1|5|U|2767

Current chains

Chain 5

28S rRNA

Nearby chains

Chain LZ

60S ribosomal protein L27