J3_8OVE_007
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AGCU*GGGAU*AUUU
- Length
- 13 nucleotides
- Bulged bases
- 8OVE|1|AA|U|1881
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OVE|1|AA|A|1741
8OVE|1|AA|G|1742
8OVE|1|AA|C|1743
8OVE|1|AA|U|1744
*
8OVE|1|AA|G|1850
8OVE|1|AA|G|1851
8OVE|1|AA|G|1852
8OVE|1|AA|A|1853
8OVE|1|AA|U|1854
*
8OVE|1|AA|A|1879
8OVE|1|AA|U|1880
8OVE|1|AA|U|1881
8OVE|1|AA|U|1882
Current chains
- Chain AA
- SSU rRNA
Nearby chains
- Chain A2
- 40S ribosomal protein S5, putative
- Chain A7
- Guanine nucleotide-binding protein subunit beta-like protein
- Chain A8
- Putative ribosomal protein S29
- Chain AK
- 40S ribosomal protein S16, putative
- Chain AL
- 40S ribosomal protein S17, putative
- Chain AQ
- Ribosomal protein S10
Coloring options: