J3_8OVE_012

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

UAU*AACAA*UAA

Length

11 nucleotides

Bulged bases

8OVE|1|BA|A|1190

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|BA|U|1110
8OVE|1|BA|A|1111
8OVE|1|BA|U|1112
*
8OVE|1|BA|A|1187
8OVE|1|BA|A|1188
8OVE|1|BA|C|1189
8OVE|1|BA|A|1190
8OVE|1|BA|A|1191
*
8OVE|1|BA|U|1225
8OVE|1|BA|A|1233
8OVE|1|BA|A|1234

Current chains

Chain BA

LUS_alpha rRNA

Nearby chains

Chain BU

60S ribosomal protein L21E, putative

Chain Bd

60S ribosomal protein L29

Chain Bw

60S ribosomal protein L7, putative