J3_8OVE_015
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUCUG*CUUAUC*GAGACAUCUG
- Length
- 21 nucleotides
- Bulged bases
- 8OVE|1|BB|U|1038
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OVE|1|BB|C|695
8OVE|1|BB|U|696
8OVE|1|BB|C|697
8OVE|1|BB|U|698
8OVE|1|BB|G|699
*
8OVE|1|BB|C|776
8OVE|1|BB|U|777
8OVE|1|BB|U|778
8OVE|1|BB|A|779
8OVE|1|BB|U|780
8OVE|1|BB|C|781
*
8OVE|1|BB|G|1032
8OVE|1|BB|A|1033
8OVE|1|BB|G|1034
8OVE|1|BB|A|1035
8OVE|1|BB|C|1036
8OVE|1|BB|A|1037
8OVE|1|BB|U|1038
8OVE|1|BB|C|1039
8OVE|1|BB|U|1040
8OVE|1|BB|G|1041
Current chains
- Chain BB
- LSUb rRNA
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BQ
- Ribosomal protein L15
- Chain Be
- 60S ribosomal protein L2, putative
- Chain Bm
- Ribosomal protein L36, putative
- Chain Bx
- 60S ribosomal protein L7a
Coloring options: