J3_8OVE_018
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUC*GUACAUG*CUCAG
- Length
- 15 nucleotides
- Bulged bases
- 8OVE|1|BH|U|28, 8OVE|1|BH|C|126, 8OVE|1|BH|A|127
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OVE|1|BH|C|9
8OVE|1|BH|U|10
8OVE|1|BH|C|11
*
8OVE|1|BH|G|23
8OVE|1|BH|U|24
8OVE|1|BH|A|25
8OVE|1|BH|C|26
8OVE|1|BH|A|27
8OVE|1|BH|U|28
8OVE|1|BH|G|29
*
8OVE|1|BH|C|124
8OVE|1|BH|U|125
8OVE|1|BH|C|126
8OVE|1|BH|A|127
8OVE|1|BH|G|128
Current chains
- Chain BH
- SrRNA 4
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BG
- Large subunit ribosomal RNA; LSU rRNA
- Chain BR
- 60S ribosomal protein L17, putative
- Chain Bf
- Ribosomal protein L3, mitochondrial, putative
- Chain Bh
- 60S ribosomal subunit protein L31, putative
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