J3_8OVE_019
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGCACG*UCGAGG*CGAGGC
- Length
- 18 nucleotides
- Bulged bases
- 8OVE|1|BH|C|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OVE|1|BH|G|47
8OVE|1|BH|G|48
8OVE|1|BH|C|49
8OVE|1|BH|A|50
8OVE|1|BH|C|51
8OVE|1|BH|G|52
*
8OVE|1|BH|U|70
8OVE|1|BH|C|71
8OVE|1|BH|G|72
8OVE|1|BH|A|73
8OVE|1|BH|G|74
8OVE|1|BH|G|75
*
8OVE|1|BH|C|90
8OVE|1|BH|G|91
8OVE|1|BH|A|92
8OVE|1|BH|G|93
8OVE|1|BH|G|94
8OVE|1|BH|C|95
Current chains
- Chain BH
- SrRNA 4
Nearby chains
- Chain A5
- 40S ribosomal protein S8
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BG
- Large subunit ribosomal RNA; LSU rRNA
- Chain BT
- 60S ribosomal protein L19, putative
- Chain BV
- 60S ribosomal protein L22, putative
- Chain BY
- Ribosomal protein L24
Coloring options: