J3_8OVE_032
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GACC*GGGUGCGUGAGUGGGCG*CGUGCGUCUCGACGC
- Length
- 36 nucleotides
- Bulged bases
- 8OVE|1|BA|G|620, 8OVE|1|BA|G|627, 8OVE|1|BA|G|628, 8OVE|1|BA|G|696, 8OVE|1|BA|C|705
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OVE|1|BA|G|531
8OVE|1|BA|A|532
8OVE|1|BA|C|533
8OVE|1|BA|C|534
*
8OVE|1|BA|G|614
8OVE|1|BA|G|615
8OVE|1|BA|G|616
8OVE|1|BA|U|617
8OVE|1|BA|G|618
8OVE|1|BA|C|619||A
8OVE|1|BA|G|620
8OVE|1|BA|U|621
8OVE|1|BA|G|622
8OVE|1|BA|A|623
8OVE|1|BA|G|624
8OVE|1|BA|U|625
8OVE|1|BA|G|626
8OVE|1|BA|G|627
8OVE|1|BA|G|628
8OVE|1|BA|C|629
8OVE|1|BA|G|630
*
8OVE|1|BA|C|693
8OVE|1|BA|G|694
8OVE|1|BA|U|695
8OVE|1|BA|G|696
8OVE|1|BA|C|697
8OVE|1|BA|G|698
8OVE|1|BA|U|699
8OVE|1|BA|C|700
8OVE|1|BA|U|701
8OVE|1|BA|C|702
8OVE|1|BA|G|703
8OVE|1|BA|A|704
8OVE|1|BA|C|705
8OVE|1|BA|G|706
8OVE|1|BA|C|707
Current chains
- Chain BA
- LUS_alpha rRNA
Nearby chains
- Chain BF
- SrRNA 6
- Chain Bc
- 60S ribosomal protein L28, putative
- Chain Bi
- 60S ribosomal protein L32, putative
- Chain Bl
- 60S ribosomal protein L35A, putative
- Chain Br
- 60S ribosomal protein L4
- Chain Bv
- 60S ribosomal protein L6, putative
- Chain Bw
- 60S ribosomal protein L7, putative
Coloring options: