J3_8OZ0_013
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- C(JMH)AG*CCAGUAA*UGAUU(A2M)AG
- Length
- 19 nucleotides
- Bulged bases
- 8OZ0|1|W|A|1675, 8OZ0|1|W|A|1679
- QA status
- Modified nucleotides: JMH, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OZ0|1|W|C|1218
8OZ0|1|W|JMH|1219
8OZ0|1|W|A|1220
8OZ0|1|W|G|1221
*
8OZ0|1|W|C|1645
8OZ0|1|W|C|1646
8OZ0|1|W|A|1647
8OZ0|1|W|G|1648
8OZ0|1|W|U|1649
8OZ0|1|W|A|1650
8OZ0|1|W|A|1651
*
8OZ0|1|W|U|1673
8OZ0|1|W|G|1674
8OZ0|1|W|A|1675
8OZ0|1|W|U|1676
8OZ0|1|W|U|1677
8OZ0|1|W|A2M|1678
8OZ0|1|W|A|1679
8OZ0|1|W|G|1680
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain D
- Eukaryotic translation initiation factor 2 subunit 1
- Chain f
- 40S ribosomal protein S5
- Chain g
- 40S ribosomal protein S16
- Chain s
- 40S ribosomal protein S28
Coloring options: