J3_8P16_036

3D structure

PDB id

8P16 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

UG*UGUU*GCAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8P16_036 not in the Motif Atlas

Homologous match to J3_4LFB_017

Geometric discrepancy: 0.1423

The information below is about J3_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_79369.1

Basepair signature

cWW-cWW-tSS-F-F-cWW-F

Number of instances in this motif group

1

Unit IDs

8P16|1|2|U|1073
8P16|1|2|G|1074
*
8P16|1|2|U|1083
8P16|1|2|G|1084
8P16|1|2|U|1085
8P16|1|2|U|1086
*
8P16|1|2|G|1099
8P16|1|2|C|1100
8P16|1|2|A|1101
8P16|1|2|A|1102

Current chains

Chain 2

16S rRNA

Nearby chains

Chain g

Small ribosomal subunit protein uS2

Chain j

Small ribosomal subunit protein uS5

Chain z

Small ribosomal subunit protein bS21