J3_8P17_013
3D structure
- PDB id
- 8P17 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E167K RF2 on E. coli 70S release complex with UGG (Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 8P17|1|2|A|975, 8P17|1|2|G|976
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8P17_013 not in the Motif Atlas
- Homologous match to J3_5J7L_006
- Geometric discrepancy: 0.0727
- The information below is about J3_5J7L_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.4
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8P17|1|2|U|955
8P17|1|2|U|956
8P17|1|2|U|957
8P17|1|2|A|958
8P17|1|2|A|959
8P17|1|2|U|960
8P17|1|2|U|961
8P17|1|2|C|962
*
8P17|1|2|G|973
8P17|1|2|A|974
8P17|1|2|A|975
8P17|1|2|G|976
8P17|1|2|A|977
8P17|1|2|A|978
8P17|1|2|C|979
8P17|1|2|C|980
8P17|1|2|U|981
8P17|1|2|U|982
8P17|1|2|A|983
8P17|1|2|C|984
*
8P17|1|2|G|1221
8P17|1|2|G|1222
8P17|1|2|C|1223
8P17|1|2|U|1224
8P17|1|2|A|1225
Current chains
- Chain 2
- 16S RNA
Nearby chains
- Chain 6
- Peptide chain release factor RF2
- Chain n
- Small ribosomal subunit protein uS9
- Chain o
- Small ribosomal subunit protein uS10
- Chain r
- Small ribosomal subunit protein uS13
- Chain s
- Small ribosomal subunit protein uS14
- Chain x
- Small ribosomal subunit protein uS19
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