J3_8P2H_035
3D structure
- PDB id
- 8P2H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- UG*UGUU*GCAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8P2H_035 not in the Motif Atlas
- Homologous match to J3_4LFB_017
- Geometric discrepancy: 0.1206
- The information below is about J3_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_79369.1
- Basepair signature
- cWW-cWW-tSS-F-F-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
8P2H|1|a|U|1084
8P2H|1|a|G|1085
*
8P2H|1|a|U|1094
8P2H|1|a|G|1095
8P2H|1|a|U|1096
8P2H|1|a|U|1097
*
8P2H|1|a|G|1110
8P2H|1|a|C|1111
8P2H|1|a|A|1112
8P2H|1|a|A|1113
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S2
- Chain f
- 30S ribosomal protein S5
Coloring options: