J3_8P2K_017

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

8P2K|1|B5|U|2606

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|B5|A|2394
8P2K|1|B5|G|2395
8P2K|1|B5|A|2396
8P2K|1|B5|U|2397
8P2K|1|B5|G|2398
*
8P2K|1|B5|C|2415
8P2K|1|B5|A|2416
8P2K|1|B5|G|2417
8P2K|1|B5|U|2418
*
8P2K|1|B5|A|2600
8P2K|1|B5|G|2601
8P2K|1|B5|G|2602
8P2K|1|B5|G|2603
8P2K|1|B5|U|2604
8P2K|1|B5|G|2605
8P2K|1|B5|U|2606
8P2K|1|B5|A|2607
8P2K|1|B5|A|2608
8P2K|1|B5|A|2609
8P2K|1|B5|U|2610

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BZ

60S ribosomal protein L27