J3_8P85_017
3D structure
- PDB id
- 8P85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Fluorolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AUUG*CUUAUU*AAGACAUU
- Length
- 18 nucleotides
- Bulged bases
- 8P85|1|1|U|2514
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8P85_017 not in the Motif Atlas
- Geometric match to J3_8P9A_059
- Geometric discrepancy: 0.0747
- The information below is about J3_8P9A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_89060.1
- Basepair signature
- cWW-F-F-F-F-cWW-F-tWH-tHS-F-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
8P85|1|1|A|2432
8P85|1|1|U|2433
8P85|1|1|U|2434
8P85|1|1|G|2435
*
8P85|1|1|C|2512
8P85|1|1|U|2513
8P85|1|1|U|2514
8P85|1|1|A|2515
8P85|1|1|U|2516
8P85|1|1|U|2517
*
8P85|1|1|A|2590
8P85|1|1|A|2591
8P85|1|1|G|2592
8P85|1|1|A|2593
8P85|1|1|C|2594
8P85|1|1|A|2595
8P85|1|1|U|2596
8P85|1|1|U|2597
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AJ
- 60S ribosomal protein L36-A
- Chain j
- 60S ribosomal protein L2-A
- Chain p
- 60S ribosomal protein L8-A
- Chain v
- 60S ribosomal protein L15-A
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