J3_8P85_074
3D structure
- PDB id
- 8P85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Fluorolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CUA*UUACG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 8P85|1|sR|A|1093
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8P85_074 not in the Motif Atlas
- Geometric match to J3_8P9A_075
- Geometric discrepancy: 0.0291
- The information below is about J3_8P9A_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_94999.1
- Basepair signature
- cWW-tWW-cWW-tWW-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
8P85|1|sR|C|1037
8P85|1|sR|U|1038
8P85|1|sR|A|1039
*
8P85|1|sR|U|1079
8P85|1|sR|U|1080
8P85|1|sR|A|1081
8P85|1|sR|C|1082
8P85|1|sR|G|1083
*
8P85|1|sR|C|1090
8P85|1|sR|A|1091
8P85|1|sR|A|1092
8P85|1|sR|A|1093
8P85|1|sR|G|1094
Current chains
- Chain sR
- 16S ribosomal RNA
Nearby chains
- Chain d1
- 40S ribosomal protein S21-A
- Chain d2
- 40S ribosomal protein S22-A
- Chain d6
- Small ribosomal subunit protein eS26B
- Chain d7
- 40S ribosomal protein S27-A
- Chain s0
- 40S ribosomal protein S0-A
Coloring options: