J3_8P9A_087

3D structure

PDB id

8P9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Methyllissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CA*UAACU*AG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_75962.2

Basepair signature

cWW-cWW-cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

8P9A|1|AR|C|1631
8P9A|1|AR|A|1632
*
8P9A|1|AR|U|1641
8P9A|1|AR|A|1642
8P9A|1|AR|A|1643
8P9A|1|AR|C|1644
8P9A|1|AR|U|1645
*
8P9A|1|AR|A|1810
8P9A|1|AR|G|1811

Current chains

Chain AR

25S ribosomal RNA

Nearby chains

Chain DB

60S ribosomal protein L27-A

Chain DI

60S ribosomal protein L34-A

Chain DM

60S ribosomal protein L38