J3_8Q5I_037
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- CC*GAUG*CUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8Q5I_037 not in the Motif Atlas
- Homologous match to J3_8C3A_058
- Geometric discrepancy: 0.0713
- The information below is about J3_8C3A_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_34320.1
- Basepair signature
- cWW-F-cWW-F-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
8Q5I|1|1|C|3263
8Q5I|1|1|C|3264
*
8Q5I|1|1|G|3280
8Q5I|1|1|A|3281
8Q5I|1|1|U|3282
8Q5I|1|1|G|3283
*
8Q5I|1|1|C|3353
8Q5I|1|1|U|3354
8Q5I|1|1|G|3355
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AE
- 60S ribosomal protein L31-B
- Chain k
- 60S ribosomal protein L3
- Chain x
- Ribosomal protein L22
Coloring options: