J3_8QCQ_034

3D structure

PDB id

8QCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

B. subtilis ApdA-stalled ribosomal complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GACAAU*ACGUCCC*GGGGC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QCQ|1|a|G|1013
8QCQ|1|a|A|1014
8QCQ|1|a|C|1015
8QCQ|1|a|A|1016
8QCQ|1|a|A|1017
8QCQ|1|a|U|1018
*
8QCQ|1|a|A|1031
8QCQ|1|a|C|1032
8QCQ|1|a|G|1033
8QCQ|1|a|U|1034
8QCQ|1|a|C|1035
8QCQ|1|a|C|1036
8QCQ|1|a|C|1037
*
8QCQ|1|a|G|1043
8QCQ|1|a|G|1044
8QCQ|1|a|G|1045
8QCQ|1|a|G|1046
8QCQ|1|a|C|1047

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

Small ribosomal subunit protein uS3

Chain n

30S ribosomal protein S14