J3_8QK7_001

3D structure

PDB id

8QK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UAA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GC*GCGAAAAG*CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8QK7_001 not in the Motif Atlas

Geometric match to J3_5J7L_036

Geometric discrepancy: 0.0551

The information below is about J3_5J7L_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_60031.2

Basepair signature

cWW-cWW-cWW-tWH-tSH-F-F

Number of instances in this motif group

7

Unit IDs

8QK7|1|1|G|30
8QK7|1|1|C|31
*
8QK7|1|1|G|474
8QK7|1|1|C|475
8QK7|1|1|G|476
8QK7|1|1|A|477
8QK7|1|1|A|478
8QK7|1|1|A|479
8QK7|1|1|A|480
8QK7|1|1|G|481
*
8QK7|1|1|C|509
8QK7|1|1|C|510

Current chains

Chain 1

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L20

Chain U

50S ribosomal protein L24