J3_8QPP_004
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 8QPP|1|A|A|985, 8QPP|1|A|G|986
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8QPP_004 not in the Motif Atlas
- Homologous match to J3_5J7L_006
- Geometric discrepancy: 0.1456
- The information below is about J3_5J7L_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.4
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8QPP|1|A|U|965
8QPP|1|A|U|966
8QPP|1|A|U|967
8QPP|1|A|A|968
8QPP|1|A|A|969
8QPP|1|A|U|970
8QPP|1|A|U|971
8QPP|1|A|C|972
*
8QPP|1|A|G|983
8QPP|1|A|A|984
8QPP|1|A|A|985
8QPP|1|A|G|986
8QPP|1|A|A|987
8QPP|1|A|A|988
8QPP|1|A|C|989
8QPP|1|A|C|990
8QPP|1|A|U|991
8QPP|1|A|U|992
8QPP|1|A|A|993
8QPP|1|A|C|994
*
8QPP|1|A|G|1230
8QPP|1|A|G|1231
8QPP|1|A|C|1232
8QPP|1|A|U|1233
8QPP|1|A|A|1234
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain J
- 30S ribosomal protein S10
- Chain M
- 30S ribosomal protein S13
- Chain N
- 30S ribosomal protein S14 type Z
- Chain S
- 30S ribosomal protein S19
Coloring options: