J3_8QPP_013

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAAUG*CGA*UAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8QPP_013 not in the Motif Atlas

Homologous match to J3_7A0S_006

Geometric discrepancy: 0.1418

The information below is about J3_7A0S_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.7

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

8QPP|1|X|C|1337
8QPP|1|X|G|1338
8QPP|1|X|A|1339
8QPP|1|X|A|1340
8QPP|1|X|U|1341
8QPP|1|X|G|1342
*
8QPP|1|X|C|1670
8QPP|1|X|G|1671
8QPP|1|X|A|1672
*
8QPP|1|X|U|1684
8QPP|1|X|A|1685
8QPP|1|X|A|1686
8QPP|1|X|G|1687

Current chains

Chain X

23S ribosomal RNA

Nearby chains