J3_8QPP_020
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GC*GGAAUCU*AGC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8QPP_020 not in the Motif Atlas
- Geometric match to J3_8C3A_082
- Geometric discrepancy: 0.2071
- The information below is about J3_8C3A_082
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_67856.2
- Basepair signature
- cWW-F-cWW-F-F-cSW-F-cWW
- Number of instances in this motif group
- 5
Unit IDs
8QPP|1|A|G|48
8QPP|1|A|C|49
*
8QPP|1|A|G|369
8QPP|1|A|G|370
8QPP|1|A|A|371
8QPP|1|A|A|372
8QPP|1|A|U|373
8QPP|1|A|C|374
8QPP|1|A|U|375
*
8QPP|1|A|A|401
8QPP|1|A|G|402
8QPP|1|A|C|403
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain L
- 30S ribosomal protein S12
- Chain P
- 30S ribosomal protein S16
Coloring options: