J3_8QPP_021
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GCCUAAU*AGGGAAUCU*AGC
- Length
- 19 nucleotides
- Bulged bases
- 8QPP|1|A|A|52, 8QPP|1|A|A|53
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8QPP_021 not in the Motif Atlas
- Homologous match to J3_4LFB_014
- Geometric discrepancy: 0.0975
- The information below is about J3_4LFB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_63856.1
- Basepair signature
- cWW-cWW-cSW-F-cWW-F-tHH-F-cWW-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8QPP|1|A|G|48
8QPP|1|A|C|49
8QPP|1|A|C|50
8QPP|1|A|U|51
8QPP|1|A|A|52
8QPP|1|A|A|53
8QPP|1|A|U|54
*
8QPP|1|A|A|367
8QPP|1|A|G|368
8QPP|1|A|G|369
8QPP|1|A|G|370
8QPP|1|A|A|371
8QPP|1|A|A|372
8QPP|1|A|U|373
8QPP|1|A|C|374
8QPP|1|A|U|375
*
8QPP|1|A|A|401
8QPP|1|A|G|402
8QPP|1|A|C|403
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain L
- 30S ribosomal protein S12
- Chain P
- 30S ribosomal protein S16
Coloring options: