J3_8QPP_035
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGGACG*CC*GAAAAGC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8QPP_035 not in the Motif Atlas
- Homologous match to J3_9DFE_013
- Geometric discrepancy: 0.1031
- The information below is about J3_9DFE_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_34864.3
- Basepair signature
- cWW-tSH-tSH-tHH-F-F-cWW-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
8QPP|1|X|G|1470
8QPP|1|X|G|1471
8QPP|1|X|G|1472
8QPP|1|X|A|1473
8QPP|1|X|C|1474
8QPP|1|X|G|1475
*
8QPP|1|X|C|1612
8QPP|1|X|C|1613
*
8QPP|1|X|G|1616
8QPP|1|X|A|1617
8QPP|1|X|A|1618
8QPP|1|X|A|1619
8QPP|1|X|A|1620
8QPP|1|X|G|1621
8QPP|1|X|C|1622
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain Z
- Large ribosomal subunit protein uL2
Coloring options: