J3_8QRK_003
3D structure
- PDB id
- 8QRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.69 Å
Loop
- Sequence
- CUC*GCAGUAA*UGAACAG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QRK|1|A|C|1192
8QRK|1|A|U|1193
8QRK|1|A|C|1194
*
8QRK|1|A|G|1428
8QRK|1|A|C|1429
8QRK|1|A|A|1430
8QRK|1|A|G|1431
8QRK|1|A|U|1432
8QRK|1|A|A|1433
8QRK|1|A|A|1434
*
8QRK|1|A|U|1456
8QRK|1|A|G|1457
8QRK|1|A|A|1458
8QRK|1|A|A|1459
8QRK|1|A|C|1460
8QRK|1|A|A|1461
8QRK|1|A|G|1462
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain F
- 28S ribosomal protein S7, mitochondrial
- Chain G
- 28S ribosomal protein S9, mitochondrial
Coloring options: