J3_8QRL_006
3D structure
- PDB id
- 8QRL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.34 Å
Loop
- Sequence
- CUUCAG*CGCAAGUA*UAAAGACG
- Length
- 22 nucleotides
- Bulged bases
- 8QRL|1|A|U|1270
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QRL|1|A|C|1268
8QRL|1|A|U|1269
8QRL|1|A|U|1270
8QRL|1|A|C|1271
8QRL|1|A|A|1272
8QRL|1|A|G|1273
*
8QRL|1|A|C|1302
8QRL|1|A|G|1303
8QRL|1|A|C|1304
8QRL|1|A|A|1305
8QRL|1|A|A|1306
8QRL|1|A|G|1307
8QRL|1|A|U|1308
8QRL|1|A|A|1309
*
8QRL|1|A|U|1316
8QRL|1|A|A|1317
8QRL|1|A|A|1318
8QRL|1|A|A|1319
8QRL|1|A|G|1320
8QRL|1|A|A|1321
8QRL|1|A|C|1322
8QRL|1|A|G|1323
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 1
- 28S ribosomal protein S35, mitochondrial
- Chain C
- 28S ribosomal protein S24, mitochondrial
- Chain D
- 28S ribosomal protein S5, mitochondrial
- Chain F
- 28S ribosomal protein S7, mitochondrial
- Chain G
- 28S ribosomal protein S9, mitochondrial
- Chain H
- 28S ribosomal protein S10, mitochondrial
- Chain K
- 28S ribosomal protein S14, mitochondrial
Coloring options: