J3_8QU1_001
3D structure
- PDB id
- 8QU1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.74 Å
Loop
- Sequence
- CUAG*CAAUAGAUAUAGUAC*GGAAAG
- Length
- 25 nucleotides
- Bulged bases
- 8QU1|1|A|U|1774
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QU1|1|A|C|1678
8QU1|1|A|U|1679
8QU1|1|A|A|1680
8QU1|1|A|G|1681
*
8QU1|1|A|C|1771
8QU1|1|A|A|1772
8QU1|1|A|A|1773
8QU1|1|A|U|1774
8QU1|1|A|A|1775
8QU1|1|A|G|1776
8QU1|1|A|A|1777
8QU1|1|A|U|1778
8QU1|1|A|A|1779
8QU1|1|A|U|1780
8QU1|1|A|A|1781
8QU1|1|A|G|1782
8QU1|1|A|U|1783
8QU1|1|A|A|1784
8QU1|1|A|C|1785
*
8QU1|1|A|G|1792
8QU1|1|A|G|1793
8QU1|1|A|A|1794
8QU1|1|A|A|1795
8QU1|1|A|A|1796
8QU1|1|A|G|1797
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain U
- 39S ribosomal protein L23, mitochondrial
- Chain V
- 39S ribosomal protein L24, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
Coloring options: