J3_8QU5_004
3D structure
- PDB id
- 8QU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- GCA*UCAAUUGAUCC*GACCAAC
- Length
- 21 nucleotides
- Bulged bases
- 8QU5|1|A|U|2895, 8QU5|1|A|A|2914
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QU5|1|A|G|2846
8QU5|1|A|C|2847
8QU5|1|A|A|2848
*
8QU5|1|A|U|2890
8QU5|1|A|C|2891
8QU5|1|A|A|2892
8QU5|1|A|A|2893
8QU5|1|A|U|2894
8QU5|1|A|U|2895
8QU5|1|A|G|2896
8QU5|1|A|A|2897
8QU5|1|A|U|2898
8QU5|1|A|C|2899
8QU5|1|A|C|2900
*
8QU5|1|A|G|2909
8QU5|1|A|A|2910
8QU5|1|A|C|2911
8QU5|1|A|C|2912
8QU5|1|A|A|2913
8QU5|1|A|A|2914
8QU5|1|A|C|2915
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 1
- 39S ribosomal protein L33, mitochondrial
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
Coloring options: