J3_8R3V_002

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8R3V_002 not in the Motif Atlas

Homologous match to J3_7RQB_005

Geometric discrepancy: 0.0677

The information below is about J3_7RQB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.4

Basepair signature

cWW-tSH-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

8R3V|1|72|C|698
8R3V|1|72|A|699
8R3V|1|72|G|700
*
8R3V|1|72|C|732
8R3V|1|72|G|733
8R3V|1|72|A|734
8R3V|1|72|A|735
8R3V|1|72|C|736
*
8R3V|1|72|G|760
8R3V|1|72|A|761
8R3V|1|72|U|762
8R3V|1|72|G|763

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain b2

50S ribosomal protein L2