J3_8R55_003
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8R55_003 not in the Motif Atlas
- Homologous match to J3_5J7L_005
- Geometric discrepancy: 0.1652
- The information below is about J3_5J7L_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_52655.4
- Basepair signature
- cWW-tSH-cWW-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
8R55|1|A|U|953
8R55|1|A|G|954
8R55|1|A|G|955
8R55|1|A|A|956
*
8R55|1|A|U|1244
8R55|1|A|A|1245
8R55|1|A|C|1246
*
8R55|1|A|G|1346
8R55|1|A|G|1347
8R55|1|A|A|1348
8R55|1|A|A|1349
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain I
- 30S ribosomal protein S9
- Chain M
- 30S ribosomal protein S13
- Chain U
- Transfer RNA; tRNA
Coloring options: