J3_8R55_012

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GGA*UUUAAAGAGUGC*GCUCAC

Length

21 nucleotides

Bulged bases

8R55|1|X|A|1134, 8R55|1|X|G|1135

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8R55|1|X|G|1101
8R55|1|X|G|1102
8R55|1|X|A|1103
*
8R55|1|X|U|1127
8R55|1|X|U|1128
8R55|1|X|U|1129
8R55|1|X|A|1130
8R55|1|X|A|1131
8R55|1|X|A|1132
8R55|1|X|G|1133
8R55|1|X|A|1134
8R55|1|X|G|1135
8R55|1|X|U|1136
8R55|1|X|G|1137
8R55|1|X|C|1138
*
8R55|1|X|G|1145
8R55|1|X|C|1146
8R55|1|X|U|1147
8R55|1|X|C|1148
8R55|1|X|A|1149
8R55|1|X|C|1150

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain 4

50S ribosomal protein L36

Chain d

Large ribosomal subunit protein uL6