J3_8R55_015
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- UUG*CUAACC*GAGACAG
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8R55_015 not in the Motif Atlas
- Homologous match to J3_4WF9_007
- Geometric discrepancy: 0.3274
- The information below is about J3_4WF9_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_07703.1
- Basepair signature
- cWW-cWW-tSH-F-F-F-F-F-cWW-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
8R55|1|X|U|2120
8R55|1|X|U|2121
8R55|1|X|G|2122
*
8R55|1|X|C|2225
8R55|1|X|U|2226
8R55|1|X|A|2227
8R55|1|X|A|2228
8R55|1|X|C|2229
8R55|1|X|C|2230
*
8R55|1|X|G|2251
8R55|1|X|A|2252
8R55|1|X|G|2253
8R55|1|X|A|2254
8R55|1|X|C|2255
8R55|1|X|A|2256
8R55|1|X|G|2257
Current chains
- Chain X
- 23S RNA (2887-MER)
Nearby chains
- Chain Z
- Large ribosomal subunit protein uL2
- Chain v
- Large ribosomal subunit protein bL28
Coloring options: