J3_8R55_028
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- UGA*UGACUGC*GAGGAAGGUG
- Length
- 20 nucleotides
- Bulged bases
- 8R55|1|A|U|1192
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8R55_028 not in the Motif Atlas
- Homologous match to J3_5J7L_054
- Geometric discrepancy: 0.1414
- The information below is about J3_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17791.2
- Basepair signature
- cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8R55|1|A|U|1126
8R55|1|A|G|1127
8R55|1|A|A|1128
*
8R55|1|A|U|1164
8R55|1|A|G|1165
8R55|1|A|A|1166
8R55|1|A|C|1167
8R55|1|A|U|1168
8R55|1|A|G|1169
8R55|1|A|C|1170
*
8R55|1|A|G|1184
8R55|1|A|A|1185
8R55|1|A|G|1186
8R55|1|A|G|1187
8R55|1|A|A|1188
8R55|1|A|A|1189
8R55|1|A|G|1190
8R55|1|A|G|1191
8R55|1|A|U|1192
8R55|1|A|G|1193
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14 type Z
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