J3_8RCL_001

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

8RCL|1|72|U|686, 8RCL|1|72|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8RCL_001 not in the Motif Atlas

Homologous match to J3_7RQB_004

Geometric discrepancy: 0.3306

The information below is about J3_7RQB_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_39238.4

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

8RCL|1|72|U|683
8RCL|1|72|G|684
8RCL|1|72|A|685
8RCL|1|72|U|686
8RCL|1|72|C|687
8RCL|1|72|U|688
8RCL|1|72|A|689
*
8RCL|1|72|U|773
8RCL|1|72|G|774
8RCL|1|72|G|775
*
8RCL|1|72|C|791
8RCL|1|72|A|792
8RCL|1|72|A|793
8RCL|1|72|A|794

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain b2

50S ribosomal protein L2

Chain l2

50S ribosomal protein L34