J3_8RCM_009

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GAAC*GUUGAU*AAUGAAC

Length

17 nucleotides

Bulged bases

8RCM|1|72|U|2833, 8RCM|1|72|A|2835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8RCM_009 not in the Motif Atlas

Homologous match to J3_5J7L_048

Geometric discrepancy: 0.1605

The information below is about J3_5J7L_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64069.1

Basepair signature

cWW-tHS-F-F-F-cWW-cWW-F-F

Number of instances in this motif group

1

Unit IDs

8RCM|1|72|G|2812
8RCM|1|72|A|2813
8RCM|1|72|A|2814
8RCM|1|72|C|2815
*
8RCM|1|72|G|2831
8RCM|1|72|U|2832
8RCM|1|72|U|2833
8RCM|1|72|G|2834
8RCM|1|72|A|2835
8RCM|1|72|U|2836
*
8RCM|1|72|A|2882
8RCM|1|72|A|2883
8RCM|1|72|U|2884
8RCM|1|72|G|2885
8RCM|1|72|A|2886
8RCM|1|72|A|2887
8RCM|1|72|C|2888

Current chains

Chain 72

23S ribosomal RNA

Nearby chains