J3_8RCS_001

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

8RCS|1|72|U|686, 8RCS|1|72|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8RCS_001 not in the Motif Atlas

Homologous match to J3_7RQB_004

Geometric discrepancy: 0.3298

The information below is about J3_7RQB_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_39238.4

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

8RCS|1|72|U|683
8RCS|1|72|G|684
8RCS|1|72|A|685
8RCS|1|72|U|686
8RCS|1|72|C|687
8RCS|1|72|U|688
8RCS|1|72|A|689
*
8RCS|1|72|U|773
8RCS|1|72|G|774
8RCS|1|72|G|775
*
8RCS|1|72|C|791
8RCS|1|72|A|792
8RCS|1|72|A|793
8RCS|1|72|A|794

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain b2

50S ribosomal protein L2

Chain l2

50S ribosomal protein L34