J3_8RCS_031

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

GC*GCGAAAAGAAC*GAGUGAAAAAGAACC

Length

28 nucleotides

Bulged bases

8RCS|1|72|A|504, 8RCS|1|72|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8RCS_031 not in the Motif Atlas

Homologous match to J3_5J7L_066

Geometric discrepancy: 0.0973

The information below is about J3_5J7L_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_92134.2

Basepair signature

cWW-cWW-cWW-F-tWH-cSS-tSS-tSH-tSH-tWW-tHH-tWH-tWW-F-F-cSS-cSW-F-tHS-cWW

Number of instances in this motif group

6

Unit IDs

8RCS|1|72|G|30
8RCS|1|72|C|31
*
8RCS|1|72|G|474
8RCS|1|72|C|475
8RCS|1|72|G|476
8RCS|1|72|A|477
8RCS|1|72|A|478
8RCS|1|72|A|479
8RCS|1|72|A|480
8RCS|1|72|G|481
8RCS|1|72|A|482
8RCS|1|72|A|483
8RCS|1|72|C|484
*
8RCS|1|72|G|496
8RCS|1|72|A|497
8RCS|1|72|G|498
8RCS|1|72|U|499
8RCS|1|72|G|500
8RCS|1|72|A|501
8RCS|1|72|A|502
8RCS|1|72|A|503
8RCS|1|72|A|504
8RCS|1|72|A|505
8RCS|1|72|G|506
8RCS|1|72|A|507
8RCS|1|72|A|508
8RCS|1|72|C|509
8RCS|1|72|C|510

Current chains

Chain 72

23S ribosomal RNA

Nearby chains