J3_8RXH_029
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- (OMG)UC*GCC(A2M)GCGAUCC*(OMG)GUGUC
- Length
- 20 nucleotides
- Bulged bases
- 8RXH|1|L2|C|1187, 8RXH|1|L2|U|1235
- QA status
- Modified nucleotides: OMG, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RXH|1|L2|OMG|1078
8RXH|1|L2|U|1079
8RXH|1|L2|C|1080
*
8RXH|1|L2|G|1182
8RXH|1|L2|C|1183
8RXH|1|L2|C|1184
8RXH|1|L2|A2M|1185
8RXH|1|L2|G|1186
8RXH|1|L2|C|1187
8RXH|1|L2|G|1188
8RXH|1|L2|A|1189
8RXH|1|L2|U|1190
8RXH|1|L2|C|1191
8RXH|1|L2|C|1192
*
8RXH|1|L2|OMG|1231
8RXH|1|L2|G|1232
8RXH|1|L2|U|1233
8RXH|1|L2|G|1234
8RXH|1|L2|U|1235
8RXH|1|L2|C|1236
Current chains
- Chain L2
- LSUb_rRNA_chain_2
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LL
- Putative 60S ribosomal protein L27A/L29
- Chain LP
- 60S ribosomal protein L18
- Chain LS
- Putative 60S ribosomal protein L21
- Chain Lp
- Putative 60S ribosomal protein L44
- Chain S4
- Transfer RNA; tRNA
Coloring options: