J3_8T2A_001

3D structure

PDB id

8T2A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of SCV PTE G18A mutant RNA in complex with Fab BL3-6

Experimental method

X-RAY DIFFRACTION

Resolution

3.17 Å

Loop

Sequence

UGAG*CUUC*GCGAGGUAGGG

Length

19 nucleotides

Bulged bases

8T2A|1|R|G|15

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8T2A_001 not in the Motif Atlas

Geometric match to J3_8T29_001

Geometric discrepancy: 0.1064

The information below is about J3_8T29_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_41596.1

Basepair signature

cWW-F-F-F-F-F-cWW-F-F-F-F-cWW-F-F-F

Number of instances in this motif group

1

Unit IDs

8T2A|1|R|U|14
8T2A|1|R|G|15
8T2A|1|R|A|16
8T2A|1|R|G|17
*
8T2A|1|R|C|50
8T2A|1|R|U|51
8T2A|1|R|U|52
8T2A|1|R|C|53
*
8T2A|1|R|G|67
8T2A|1|R|C|68
8T2A|1|R|G|69
8T2A|1|R|A|70
8T2A|1|R|G|71
8T2A|1|R|G|72
8T2A|1|R|U|73
8T2A|1|R|A|74
8T2A|1|R|G|75
8T2A|1|R|G|76
8T2A|1|R|G|77

Current chains

Chain R

RNA (90-MER)

Nearby chains