J3_8T3C_009
3D structure
- PDB id
- 8T3C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- UAG*CGUAGC*GUCGA
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T3C|1|A1|U|829
8T3C|1|A1|A|830
8T3C|1|A1|G|831
*
8T3C|1|A1|C|863
8T3C|1|A1|G|864
8T3C|1|A1|U|865
8T3C|1|A1|A|866
8T3C|1|A1|G|867
8T3C|1|A1|C|868
*
8T3C|1|A1|G|891
8T3C|1|A1|U|892
8T3C|1|A1|C|893
8T3C|1|A1|G|894
8T3C|1|A1|A|895
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AA
- 60S ribosomal protein L2-A
- Chain AR
- 60S ribosomal protein L19-A
- Chain Ag
- 60S ribosomal protein L34-A
- Chain Ap
- 60S ribosomal protein L43-A
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