J3_8T5H_034
3D structure
- PDB id
- 8T5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUU*GCUA
- Length
- 22 nucleotides
- Bulged bases
- 8T5H|1|v|A|975, 8T5H|1|v|G|976
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T5H|1|v|U|955
8T5H|1|v|U|956
8T5H|1|v|U|957
8T5H|1|v|A|958
8T5H|1|v|A|959
8T5H|1|v|U|960
8T5H|1|v|U|961
8T5H|1|v|C|962
*
8T5H|1|v|G|973
8T5H|1|v|A|974
8T5H|1|v|A|975
8T5H|1|v|G|976
8T5H|1|v|A|977
8T5H|1|v|A|978
8T5H|1|v|C|979
8T5H|1|v|C|980
8T5H|1|v|U|981
8T5H|1|v|U|982
*
8T5H|1|v|G|1222
8T5H|1|v|C|1223
8T5H|1|v|U|1224
8T5H|1|v|A|1225
Current chains
- Chain v
- 16S
Nearby chains
- Chain i
- 30S ribosomal protein S10
- Chain l
- 30S ribosomal protein S13
- Chain m
- 30S ribosomal protein S14
- Chain r
- 30S ribosomal protein S19
Coloring options: