J3_8T8C_013
3D structure
- PDB id
- 8T8C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site formyl-MFI-tripeptidyl-tRNA analog ACCA-IFMf at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CUUG*CAG*CUUACG
- Length
- 13 nucleotides
- Bulged bases
- 8T8C|1|1a|U|1212
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8T8C_013 not in the Motif Atlas
- Homologous match to J3_4LFB_005
- Geometric discrepancy: 0.168
- The information below is about J3_4LFB_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82572.1
- Basepair signature
- cWW-tSH-tWW-F-cWW-tHW-F-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
8T8C|1|1a|C|990
8T8C|1|1a|U|991
8T8C|1|1a|U|992
8T8C|1|1a|G|993
*
8T8C|1|1a|C|1045
8T8C|1|1a|A|1046
8T8C|1|1a|G|1047
*
8T8C|1|1a|C|1210
8T8C|1|1a|U|1211
8T8C|1|1a|U|1212
8T8C|1|1a|A|1213
8T8C|1|1a|C|1214
8T8C|1|1a|G|1215
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1n
- 30S ribosomal protein S14 type Z
Coloring options: