J3_8UJ9_026
3D structure
- PDB id
- 8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- AC*GAGAAUU*ACACU
- Length
- 14 nucleotides
- Bulged bases
- 8UJ9|1|L8|A|62
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8UJ9_026 not in the Motif Atlas
- Homologous match to J3_8CRE_027
- Geometric discrepancy: 0.1871
- The information below is about J3_8CRE_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_35667.2
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
8UJ9|1|L8|A|44
8UJ9|1|L8|C|45
*
8UJ9|1|L8|G|58
8UJ9|1|L8|A|59
8UJ9|1|L8|G|60
8UJ9|1|L8|A|61
8UJ9|1|L8|A|62
8UJ9|1|L8|U|63
8UJ9|1|L8|U|64
*
8UJ9|1|L8|A|95
8UJ9|1|L8|C|96
8UJ9|1|L8|A|97
8UJ9|1|L8|C|98
8UJ9|1|L8|U|99
Current chains
- Chain L8
- 5.8S rRNA [Homo sapiens]
Nearby chains
- Chain LX
- 60S ribosomal protein L23a
- Chain Lh
- 60S ribosomal protein L35
- Chain Lj
- 60S ribosomal protein L37
- Chain Ll
- 60S ribosomal protein L39
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