J3_8UTI_017
3D structure
- PDB id
- 8UTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- AUUG*CUUAUU*AAGACAUU
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8UTI_017 not in the Motif Atlas
- Homologous match to J3_8P9A_059
- Geometric discrepancy: 0.1129
- The information below is about J3_8P9A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_89060.1
- Basepair signature
- cWW-F-F-F-F-cWW-F-tWH-tHS-F-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
8UTI|1|A|A|2432
8UTI|1|A|U|2433
8UTI|1|A|U|2434
8UTI|1|A|G|2435
*
8UTI|1|A|C|2512
8UTI|1|A|U|2513
8UTI|1|A|U|2514
8UTI|1|A|A|2515
8UTI|1|A|U|2516
8UTI|1|A|U|2517
*
8UTI|1|A|A|2590
8UTI|1|A|A|2591
8UTI|1|A|G|2592
8UTI|1|A|A|2593
8UTI|1|A|C|2594
8UTI|1|A|A|2595
8UTI|1|A|U|2596
8UTI|1|A|U|2597
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LD
- 60S ribosomal protein L2-A
- Chain LJ
- 60S ribosomal protein L8-A
- Chain LP
- 60S ribosomal protein L15-A
- Chain Lk
- 60S ribosomal protein L36-A
Coloring options: