J3_8UU6_005
3D structure
- PDB id
- 8UU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGAAUA*UGA*UAAG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8UU6_005 not in the Motif Atlas
- Homologous match to J3_7A0S_006
- Geometric discrepancy: 0.1311
- The information below is about J3_7A0S_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32852.6
- Basepair signature
- cWW-tSH-F-F-F-cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
8UU6|1|A|C|1342
8UU6|1|A|G|1343
8UU6|1|A|A|1344
8UU6|1|A|A|1345
8UU6|1|A|U|1346
8UU6|1|A|A|1347
*
8UU6|1|A|U|1674
8UU6|1|A|G|1675
8UU6|1|A|A|1676
*
8UU6|1|A|U|1688
8UU6|1|A|A|1689
8UU6|1|A|A|1690
8UU6|1|A|G|1691
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: